Efficient Generation of Transcriptomic Profiles by Random Composite Measurements.
Cleary, Brian; Cong, Le; Cheung, Anthea; Lander, Eric S; Regev, Aviv.
; 171(6): 1424-1436.e18, 2017 Nov 30.
Artigo em Inglês | MEDLINE | ID: mdl-29153835
smallWig: parallel compression of RNA-seq WIG files.
Quark enables semi-reference-based compression of RNA-seq data.
Perturb-Seq: Dissecting Molecular Circuits with Scalable Single-Cell RNA Profiling of Pooled Genetic Screens.
Systematic evaluation of spliced alignment programs for RNA-seq data.
FastqPuri: high-performance preprocessing of RNA-seq data.
Empirical estimation of sequencing error rates using smoothing splines.
Quantification of experimentally induced nucleotide conversions in high-throughput sequencing datasets.
Resolving host-pathogen interactions by dual RNA-seq.
Snaptron: querying splicing patterns across tens of thousands of RNA-seq samples.
Threshold-seq: a tool for determining the threshold in short RNA-seq datasets.