Pesquisa | Biblioteca Virtual em Saúde

1.

Comparison and assessment of family- and population-based genotype imputation methods in large pedigrees.

Ullah, Ehsan; Mall, Raghvendra; Abbas, Mostafa M; Kunji, Khalid; Nato, Alejandro Q; Bensmail, Halima; Wijsman, Ellen M; Saad, Mohamad.

Genome Res; 2018 Dec 04.

Artigo em Inglês | MEDLINE | ID: mdl-30514702

2.

Analysis of pedigree data in populations with multiple ancestries: Strategies for dealing with admixture in Caribbean Hispanic families from the ADSP.

Nafikov, Rafael A; Nato, Alejandro Q; Sohi, Harkirat; Wang, Bowen; Brown, Lisa; Horimoto, Andrea R; Vardarajan, Badri N; Barral, Sandra M; Tosto, Giuseppe; Mayeux, Richard P; Thornton, Timothy A; Blue, Elizabeth; Wijsman, Ellen M.

Genet Epidemiol; 42(6): 500-515, 2018 09.

Artigo em Inglês | MEDLINE | ID: mdl-29862559

3.

GIGI-Quick: a fast approach to impute missing genotypes in genome-wide association family data.

Kunji, Khalid; Ullah, Ehsan; Nato, Alejandro Q; Wijsman, Ellen M; Saad, Mohamad.

Bioinformatics; 34(9): 1591-1593, 2018 May 01.

Artigo em Inglês | MEDLINE | ID: mdl-29267877

4.

Quality control and integration of genotypes from two calling pipelines for whole genome sequence data in the Alzheimer's disease sequencing project.

Naj, Adam C; Lin, Honghuang; Vardarajan, Badri N; White, Simon; Lancour, Daniel; Ma, Yiyi; Schmidt, Michael; Sun, Fangui; Butkiewicz, Mariusz; Bush, William S; Kunkle, Brian W; Malamon, John; Amin, Najaf; Choi, Seung Hoan; Hamilton-Nelson, Kara L; van der Lee, Sven J; Gupta, Namrata; Koboldt, Daniel C; Saad, Mohamad; Wang, Bowen; Nato, Alejandro Q; Sohi, Harkirat K; Kuzma, Amanda; Wang, Li-San; Adrienne Cupples, L; van Duijn, Cornelia; Seshadri, Sudha; Schellenberg, Gerard D; Boerwinkle, Eric; Bis, Joshua C; Dupuis, Josée; Salerno, William J; Wijsman, Ellen M; Martin, Eden R; DeStefano, Anita L.

Genomics; 2018 May 29.

Artigo em Inglês | MEDLINE | ID: mdl-29857119

5.

Genetic Variation in Genes Underlying Diverse Dementias May Explain a Small Proportion of Cases in the Alzheimer's Disease Sequencing Project.

Blue, Elizabeth E; Bis, Joshua C; Dorschner, Michael O; Tsuang, Debby W; Barral, Sandra M; Beecham, Gary; Below, Jennifer E; Bush, William S; Butkiewicz, Mariusz; Cruchaga, Carlos; DeStefano, Anita; Farrer, Lindsay A; Goate, Alison; Haines, Jonathan; Jaworski, Jim; Jun, Gyungah; Kunkle, Brian; Kuzma, Amanda; Lee, Jenny J; Lunetta, Kathryn L; Ma, Yiyi; Martin, Eden; Naj, Adam; Nato, Alejandro Q; Navas, Patrick; Nguyen, Hiep; Reitz, Christiane; Reyes, Dolly; Salerno, William; Schellenberg, Gerard D; Seshadri, Sudha; Sohi, Harkirat; Thornton, Timothy A; Valadares, Otto; van Duijn, Cornelia; Vardarajan, Badri N; Wang, Li-San; Boerwinkle, Eric; Dupuis, Josée; Pericak-Vance, Margaret A; Mayeux, Richard; Wijsman, Ellen M.

Dement Geriatr Cogn Disord; 45(1-2): 1-17, 2018.

Artigo em Inglês | MEDLINE | ID: mdl-29486463

6.

The orphan GPCR, Gpr161, regulates the retinoic acid and canonical Wnt pathways during neurulation.

Li, Bo I; Matteson, Paul G; Ababon, Myka F; Nato, Alejandro Q; Lin, Yong; Nanda, Vikas; Matise, Tara C; Millonig, James H.

Dev Biol; 402(1): 17-31, 2015 Jun 01.

Artigo em Inglês | MEDLINE | ID: mdl-25753732

7.

PBAP: a pipeline for file processing and quality control of pedigree data with dense genetic markers.

Nato, Alejandro Q; Chapman, Nicola H; Sohi, Harkirat K; Nguyen, Hiep D; Brkanac, Zoran; Wijsman, Ellen M.

Bioinformatics; 31(23): 3790-8, 2015 Dec 01.

Artigo em Inglês | MEDLINE | ID: mdl-26231429

8.

Whole exome sequencing in extended families with autism spectrum disorder implicates four candidate genes.

Chapman, Nicola H; Nato, Alejandro Q; Bernier, Raphael; Ankenman, Katy; Sohi, Harkirat; Munson, Jeff; Patowary, Ashok; Archer, Marilyn; Blue, Elizabeth M; Webb, Sara Jane; Coon, Hilary; Raskind, Wendy H; Brkanac, Zoran; Wijsman, Ellen M.

Hum Genet; 134(10): 1055-68, 2015 Oct.

Artigo em Inglês | MEDLINE | ID: mdl-26204995

9.

Post-genome-wide association study challenges for lipid traits: describing age as a modifier of gene-lipid associations in the Population Architecture using Genomics and Epidemiology (PAGE) study.

Dumitrescu, Logan; Carty, Cara L; Franceschini, Nora; Hindorff, Lucia A; Cole, Shelley A; Buzková, Petra; Schumacher, Fredrick R; Eaton, Charles B; Goodloe, Robert J; Duggan, David J; Haessler, Jeff; Cochran, Barbara; Henderson, Brian E; Cheng, Iona; Johnson, Karen C; Carlson, Chris S; Love, Shelly-Ann; Brown-Gentry, Kristin; Nato, Alejandro Q; Quibrera, Miguel; Anderson, Garnet; Shohet, Ralph V; Ambite, José Luis; Wilkens, Lynne R; Marchand, Loïc Le; Haiman, Christopher A; Buyske, Steven; Kooperberg, Charles; North, Kari E; Fornage, Myriam; Crawford, Dana C.

Ann Hum Genet; 77(5): 416-25, 2013 Sep.

Artigo em Inglês | MEDLINE | ID: mdl-23808484

10.

No evidence of interaction between known lipid-associated genetic variants and smoking in the multi-ethnic PAGE population.

Dumitrescu, Logan; Carty, Cara L; Franceschini, Nora; Hindorff, Lucia A; Cole, Shelley A; Buzková, Petra; Schumacher, Fredrick R; Eaton, Charles B; Goodloe, Robert J; Duggan, David J; Haessler, Jeff; Cochran, Barbara; Henderson, Brian E; Cheng, Iona; Johnson, Karen C; Carlson, Chris S; Love, Shelly-Anne; Brown-Gentry, Kristin; Nato, Alejandro Q; Quibrera, Miguel; Shohet, Ralph V; Ambite, José Luis; Wilkens, Lynne R; Le Marchand, Loïc; Haiman, Christopher A; Buyske, Steven; Kooperberg, Charles; North, Kari E; Fornage, Myriam; Crawford, Dana C.

Hum Genet; 132(12): 1427-31, 2013 Dec.

Artigo em Inglês | MEDLINE | ID: mdl-24100633

11.

Single-variant and multi-variant trend tests for genetic association with next-generation sequencing that are robust to sequencing error.

Kim, Wonkuk; Londono, Douglas; Zhou, Lisheng; Xing, Jinchuan; Nato, Alejandro Q; Musolf, Anthony; Matise, Tara C; Finch, Stephen J; Gordon, Derek.

Hum Hered; 74(3-4): 172-83, 2012.

Artigo em Inglês | MEDLINE | ID: mdl-23594495

12.

Genetic Candidate Variants in Two Multigenerational Families with Childhood Apraxia of Speech.

Peter, Beate; Wijsman, Ellen M; Nato, Alejandro Q; Matsushita, Mark M; Chapman, Kathy L; Stanaway, Ian B; Wolff, John; Oda, Kaori; Gabo, Virginia B; Raskind, Wendy H.

PLoS One; 11(4): e0153864, 2016.

Artigo em Inglês | MEDLINE | ID: mdl-27120335

13.

Identity-by-descent estimation with population- and pedigree-based imputation in admixed family data.

Saad, Mohamad; Nato, Alejandro Q; Grimson, Fiona L; Lewis, Steven M; Brown, Lisa A; Blue, Elizabeth M; Thornton, Timothy A; Thompson, Elizabeth A; Wijsman, Ellen M.

BMC Proc; 10(Suppl 7): 295-301, 2016.

Artigo em Inglês | MEDLINE | ID: mdl-27980652

14.

Estimating relationships between phenotypes and subjects drawn from admixed families.

Blue, Elizabeth M; Brown, Lisa A; Conomos, Matthew P; Kirk, Jennifer L; Nato, Alejandro Q; Popejoy, Alice B; Raffa, Jesse; Ranola, John; Wijsman, Ellen M; Thornton, Timothy.

BMC Proc; 10(Suppl 7): 357-362, 2016.

Artigo em Inglês | MEDLINE | ID: mdl-27980662

15.

Mapping genes with longitudinal phenotypes via Bayesian posterior probabilities.

Musolf, Anthony; Nato, Alejandro Q; Londono, Douglas; Zhou, Lisheng; Matise, Tara C; Gordon, Derek.

BMC Proc; 8(Suppl 1 Genetic Analysis Workshop 18Vanessa Olmo): S81, 2014.

Artigo em Inglês | MEDLINE | ID: mdl-25519410

16.

Lack of associations of ten candidate coronary heart disease risk genetic variants and subclinical atherosclerosis in four US populations: the Population Architecture using Genomics and Epidemiology (PAGE) study.

Zhang, Lili; Buzkova, Petra; Wassel, Christina L; Roman, Mary J; North, Kari E; Crawford, Dana C; Boston, Jonathan; Brown-Gentry, Kristin D; Cole, Shelley A; Deelman, Ewa; Goodloe, Robert; Wilson, Sarah; Heiss, Gerardo; Jenny, Nancy S; Jorgensen, Neal W; Matise, Tara C; McClellan, Bob E; Nato, Alejandro Q; Ritchie, Marylyn D; Franceschini, Nora; Kao, W H Linda.

Atherosclerosis; 228(2): 390-9, 2013 Jun.

Artigo em Inglês | MEDLINE | ID: mdl-23587283

17.

Divergent haplotypes and human history as revealed in a worldwide survey of X-linked DNA sequence variation.

Shimada, Makoto K; Panchapakesan, Karuna; Tishkoff, Sarah A; Nato, Alejandro Q; Hey, Jody.

Mol Biol Evol; 24(3): 687-98, 2007 Mar.

Artigo em Inglês | MEDLINE | ID: mdl-17175528

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